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A Novel Ant Colony Optimization Based Algorithm for Identifying Gene Regulatory Elements
Journal Title Journal of Computers
Journal Abbreviation jcp
Publisher Group Academy Publisher
Website http://ojs.academypublisher.com
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Title A Novel Ant Colony Optimization Based Algorithm for Identifying Gene Regulatory Elements
Authors Chen, Ling; Chen, Hanwu; Liu, Wei; Chen, Yixin
Abstract It is one of the most important tasks in bioinformatics to identify the regulatory elements in gene sequences.  Most of the current algorithms for identifying regulatory elements are easily to converge into a local optimum, and have high time complexity. Therefore, we propose a novel optimization algorithm named ACRI(ant-colony-regulatory-identification) for identifying regulatory elements. Based on powerful optimization ability of ant-colony algorithm, the algorithm ACRI can not only improve the quality of results, but also solve the problem at a very high speed.  Experimental results show that ACRI can obtain higher quality of solutions using less computational time than other traditional algorithms.
Publisher ACADEMY PUBLISHER
Date 2013-03-01
Source Journal of Computers Vol 8, No 3 (2013): Special Issue: Parallel Computing
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